Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 18 curated entries in PaperBLAST's database that match '2.7.1.45' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3631: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

A0A0B6VMB0: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Flavobacterium sp.

44% id,
100% cov

2afbA / Q9WXS2: Crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution

40% id,
99% cov

Q9WXS2: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Thermotoga maritima

39% id,
100% cov

More...

Echvi_0156: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

32% id,
87% cov

Echvi_2804: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

23% id,
88% cov

Echvi_0157: hexose kinase, 1-phosphofructokinase family
is similar to:
PaperBLAST

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

29% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory