Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 11 curated entries in PaperBLAST's database that match '2.7.1.56' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0157: hexose kinase, 1-phosphofructokinase family
is similar to:
PaperBLAST

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

28% id,
99% cov

K1PF_XANCP / P23354: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Xanthomonas campestris

26% id,
94% cov

K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae

25% id,
97% cov

Echvi_0561: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii
D4GYE6: 1-phosphofructokinase (EC 2.7.1.56) from Haloferax volcanii

25% id,
88% cov

K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae

21% id,
100% cov

K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli
Fpk / b2168: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli
fruK / P0AEW9: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli

23% id,
86% cov

Echvi_2804: Sugar kinases, ribokinase family
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii
D4GYE6: 1-phosphofructokinase (EC 2.7.1.56) from Haloferax volcanii

27% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory