Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 23 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1094: Acetyltransferases, including N-acetylases of ribosomal proteins
is similar to:
PaperBLAST

Q8P8J7: acetylglutamate kinase (EC 2.7.2.8) from Xanthomonas campestris

58% id,
94% cov

Echvi_3850: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

37% id,
91% cov

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

32% id,
91% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

37% id,
76% cov

More...

Echvi_3847: N-acetyl-gamma-glutamyl-phosphate reductase, common form
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae
Q01217: acetylglutamate kinase (EC 2.7.2.8) from Saccharomyces cerevisiae

35% id,
36% cov

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

35% id,
35% cov

Echvi_2634: glutamate 5-kinase
is similar to:
PaperBLAST

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

25% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1254425-1255078 (frame -2) on Echvi_Contig97.1
is similar to:
PaperBLAST

Q8P8J7: acetylglutamate kinase (EC 2.7.2.8) from Xanthomonas campestris
Also see hits to annotated proteins above

56% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory