Curated BLAST for Genomes


Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 17 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3360: Zn-dependent hydrolases, including glyoxylases
is similar to:

P0CJ63: 1,4-lactonase (EC; quorum-quenching N-acyl-homoserine lactonase (EC from Bacillus thuringiensis

22% id,
96% cov

Echvi_3767: Gluconolactonase
is similar to:

B2LYJ5: 1,4-lactonase (EC from Fusarium proliferatum

26% id,
81% cov

Echvi_0323: Gluconolactonase
is similar to:

Q15165: arylesterase (EC; 1,4-lactonase (EC from Homo sapiens

29% id,
45% cov

P27169: arylesterase (EC; 1,4-lactonase (EC; quorum-quenching N-acyl-homoserine lactonase (EC; aryldialkylphosphatase (EC; diisopropyl-fluorophosphatase (EC from Homo sapiens

36% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory