Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 134 curated entries in PaperBLAST's database that match '3.2.1.28' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2045: Glucoamylase and related glycosyl hydrolases
is similar to:
PaperBLAST

TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum

33% id,
98% cov

TREH_THEVO / Q978S7: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma volcanium

33% id,
93% cov

TREH1_SULAC / Q4J7W0: Trehalase 1; Alpha,alpha-trehalase; SaTreH1; EC 3.2.1.28 from Sulfolobus acidocaldarius
A0A2Z5U3T3: alpha,alpha-trehalase (EC 3.2.1.28) from Sulfolobus acidocaldarius

28% id,
98% cov

More...

Echvi_2850: Glycosidases
is similar to:
PaperBLAST

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

32% id,
98% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

35% id,
43% cov

Echvi_0917: hypothetical protein
is similar to:
PaperBLAST

BAG85338.1: trehalase (TreH) (EC 3.2.1.28)
B6ZIV1: alpha,alpha-trehalase (EC 3.2.1.28) from Nostoc punctiforme

24% id,
67% cov

Q9W2M2: alpha,alpha-trehalase (EC 3.2.1.28) from Drosophila melanogaster

24% id,
44% cov

TREA_ECOLI / P13482: Periplasmic trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Tre37A; EC 3.2.1.28 from Escherichia coli
Tre / b1197: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli
AAC74281.1: α,α-trehalase (periplasmic) (TreA;OsmA) (Tre37A) (EC 3.2.1.28)
treA / P13482: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli

24% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory