Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 14 curated entries in PaperBLAST's database that match '3.2.1.48' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2806: Beta-fructosidases (levanase/invertase)
is similar to:
PaperBLAST

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

32% id,
90% cov

AO356_28590: sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

37% id,
64% cov

Pf6N2E2_1650: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

37% id,
64% cov

Echvi_2807: Beta-fructosidases (levanase/invertase)
is similar to:
PaperBLAST

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

30% id,
94% cov

AO356_28590: sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

32% id,
87% cov

Pf6N2E2_1650: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

31% id,
86% cov

Echvi_2850: Glycosidases
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

35% id,
43% cov

Q6UVM5: sucrose alpha-glucosidase (EC 3.2.1.48) from Xanthomonas axonopodis

27% id,
41% cov

Echvi_2842: Alpha-glucosidases, family 31 of glycosyl hydrolases
is similar to:
PaperBLAST

B5THE3: sucrose alpha-glucosidase (EC 3.2.1.48) from Mus musculus

27% id,
39% cov

AAA65097.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

29% id,
36% cov

AAA31459.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.20|3.2.1.48)

28% id,
35% cov

More...

Echvi_4038: Alpha-glucosidases, family 31 of glycosyl hydrolases
is similar to:
PaperBLAST

B5THE3: sucrose alpha-glucosidase (EC 3.2.1.48) from Mus musculus

26% id,
31% cov

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

27% id,
24% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

27% id,
24% cov

More...

Echvi_4241: Beta-xylosidase
is similar to:
PaperBLAST

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

34% id,
15% cov

Echvi_1571: Alpha-glucosidases, family 31 of glycosyl hydrolases
is similar to:
PaperBLAST

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

24% id,
20% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

24% id,
20% cov

BAA25370.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

27% id,
17% cov

More...

Echvi_1677: Alpha-glucosidases, family 31 of glycosyl hydrolases
is similar to:
PaperBLAST

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

25% id,
16% cov

BAA25370.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

26% id,
15% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

25% id,
15% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory