Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 45 curated entries in PaperBLAST's database that match '3.2.1.80' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2807: Beta-fructosidases (levanase/invertase)
is similar to:
PaperBLAST

AAO78188.1: β-fructofuranosidase (BT3082;BT_3082) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

68% id,
99% cov

AAK00768.2: exoinulinase (EC 3.2.1.80)

36% id,
91% cov

AAO76866.1: β-fructofuranosidase (BT1759) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

33% id,
92% cov

More...

Echvi_2806: Beta-fructosidases (levanase/invertase)
is similar to:
PaperBLAST

AAK00768.2: exoinulinase (EC 3.2.1.80)

39% id,
94% cov

AFE82292.1: inulinase (InuA;InuAJB13) (EC 3.2.1.80)

42% id,
88% cov

INUE_ASPAW / Q96TU3: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus awamori
CAC44220.1: exo-inulinase (Inu1) (EC 3.2.1.80)
Q96TU3: fructan beta-fructosidase (EC 3.2.1.80) from Aspergillus awamori

38% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory