Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 6 curated entries in PaperBLAST's database that match '3.3.2.12' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2341: naphthoate synthase (dihydroxynaphthoic acid synthetase)
is similar to:
PaperBLAST

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

30% id,
93% cov

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

30% id,
93% cov

Echvi_0069: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

29% id,
93% cov

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

29% id,
93% cov

Echvi_3822: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

25% id,
70% cov

Echvi_1684: Acyl dehydratase
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

35% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory