Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 17 curated entries in PaperBLAST's database that match '3.5.1.18' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1201: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
is similar to:
PaperBLAST

DAPE_NEIMB / Q9JYL2: Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Neisseria meningitidis
Q9JYL2: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Neisseria meningitidis

25% id,
56% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory