Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3612: Imidazolonepropionase and related amidohydrolases
is similar to:
PaperBLAST

hutI / O31200: imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida

29% id,
38% cov

Echvi_3613: Imidazolonepropionase and related amidohydrolases
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

27% id,
42% cov

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

49% id,
10% cov

Echvi_0130: Predicted metal-dependent hydrolase with the TIM-barrel fold
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

29% id,
29% cov

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

27% id,
28% cov

Pf6N2E2_3798: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

32% id,
23% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory