Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 20 curated entries in PaperBLAST's database that match '3.5.3.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3131: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
is similar to:
PaperBLAST

Q8YUM9: agmatinase (EC 3.5.3.11) from Anabaena sp.

49% id,
98% cov

speB / P70999: agmatinase (EC 3.5.3.11) from Bacillus subtilis

32% id,
80% cov

SPEB_METJA / Q57757: Agmatinase; EC 3.5.3.11 from Methanocaldococcus jannaschii
Q57757: agmatinase (EC 3.5.3.11) from Methanocaldococcus jannaschii

32% id,
66% cov

More...

Echvi_2468: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
is similar to:
PaperBLAST

Q8YUM9: agmatinase (EC 3.5.3.11) from Anabaena sp.

28% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory