Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 37 curated entries in PaperBLAST's database that match '3.5.99.6' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0158: Predicted phosphosugar isomerases
is similar to:
PaperBLAST

AGAS_SHESA / A0KYQ7: D-galactosamine-6-phosphate deaminase AgaS; GalN-6-P deaminase; Glucosamine-6-phosphate deaminase; GlcN-6-P deaminase; EC 3.5.99.-; EC 3.5.99.6 from Shewanella sp.

39% id,
96% cov

Echvi_4314: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
is similar to:
PaperBLAST

nagB / A3CLX4: glucosamine-6-phosphate deaminase subunit (EC 3.5.99.6) from Streptococcus sanguinis

31% id,
94% cov

GAMA_BACSU / O31458: Glucosamine-6-phosphate deaminase 2; GlcN6P deaminase 2; GNPDA 2; Glucosamine-6-phosphate isomerase 2; EC 3.5.99.6 from Bacillus subtilis

31% id,
91% cov

A8YZR7: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Staphylococcus aureus

32% id,
87% cov

More...

Echvi_1524: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
is similar to:
PaperBLAST

PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens

30% id,
97% cov

Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis

29% id,
98% cov

Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp.

29% id,
98% cov

More...

Echvi_3893: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
is similar to:
PaperBLAST

U5LXR4: glucosamine-6-phosphate deaminase (EC 3.5.99.6) from Gallus gallus

32% id,
68% cov

NAGB_STRCO / Q9K487: Glucosamine-6-phosphate deaminase; GlcN6P deaminase; GNPDA; Glucosamine-6-phosphate isomerase; EC 3.5.99.6 from Streptomyces coelicolor

32% id,
56% cov

GAMA_BACSU / O31458: Glucosamine-6-phosphate deaminase 2; GlcN6P deaminase 2; GNPDA 2; Glucosamine-6-phosphate isomerase 2; EC 3.5.99.6 from Bacillus subtilis

37% id,
48% cov

More...

Echvi_3533: 6-phospho 3-hexuloisomerase
is similar to:
PaperBLAST

Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis

26% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory