Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 65 curated entries in PaperBLAST's database that match '3.7.1.2'.

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2481: fumarylacetoacetase
is similar to:
PaperBLAST

FAAA_CAEEL / Q94272: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Caenorhabditis elegans
Q94272: fumarylacetoacetase (EC 3.7.1.2) from Caenorhabditis elegans

55% id,
100% cov

FAAA_HUMAN / P16930: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Homo sapiens
FAH / P16930: Fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens
P16930: fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens

53% id,
99% cov

FAAA_RAT / P25093: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Rattus norvegicus

52% id,
99% cov

More...

Echvi_2939: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

53% id,
100% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

50% id,
100% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

50% id,
100% cov

More...

Echvi_1692: Ribulose 1,5-bisphosphate carboxylase, large subunit
is similar to:
PaperBLAST

OIAT_XANP2 / A7IJG7: 3-oxo-isoapionate-4-phosphate transcarboxylase/hydrolase; EC 3.7.1.28 from Xanthobacter autotrophicus
oiaT / A7IJG7: 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase (EC 3.7.1.28) from Xanthobacter autotrophicus
A7IJG7: 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase (EC 3.7.1.28) from Xanthobacter autotrophicus

53% id,
97% cov

Echvi_2930: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
is similar to:
PaperBLAST

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

38% id,
91% cov

A0A080VH08: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Pseudomonas aeruginosa

37% id,
85% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

38% id,
80% cov

More...

Echvi_2056: acetolactate synthase, large subunit, biosynthetic type
is similar to:
PaperBLAST

BWI76_RS03090: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Klebsiella michiganensis

26% id,
85% cov

Echvi_0069: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

BAMA_THAAR / O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Beta-oxoacyl-CoA hydrolase; Oah; EC 3.7.1.21 from Thauera aromatica
O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase (EC 3.7.1.21) from Thauera aromatica

26% id,
68% cov

BAMA_SYNAS / Q2LXU2: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Syntrophus aciditrophicus
bamA / Q2LXU2: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase monomer (EC 3.7.1.21) from Syntrophus aciditrophicus

28% id,
36% cov

Echvi_0662: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

26% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory