Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13'.

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2849: fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
is similar to:
PaperBLAST

A0KGD4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Aeromonas hydrophila

66% id,
97% cov

D0ZEE4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Vibrio anguillarum

66% id,
97% cov

A7MTQ6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Vibrio campbellii

66% id,
97% cov

More...

Echvi_3158: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
is similar to:
PaperBLAST

ALF1_ECOLI / P0A991: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Escherichia coli
DhnA / b2097: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli
fbaB / P0A991: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli

62% id,
99% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

24% id,
98% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

33% id,
64% cov

More...

Echvi_0155: ketose-bisphosphate aldolases
is similar to:
PaperBLAST

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

41% id,
93% cov

Q8Y498: fructose-bisphosphate aldolase (EC 4.1.2.13) from Listeria monocytogenes

38% id,
96% cov

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

41% id,
89% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3415103-3416218 (frame +2) on Echvi_Contig97.1
is similar to:
PaperBLAST

A0KGD4: fructose-bisphosphate aldolase (EC 4.1.2.13) from Aeromonas hydrophila
Also see hits to annotated proteins above

65% id,
99% cov

ALF1_PARBA / Q96UH7: Fructose-bisphosphate aldolase 1; FBP aldolase 1; FBPA 1; Fructose-1,6-bisphosphate aldolase 1; EC 4.1.2.13 from Paracoccidioides lutzii
Q96UH7: fructose-bisphosphate aldolase (EC 4.1.2.13) from Paracoccidioides lutzii
Also see hits to annotated proteins above

52% id,
99% cov

fba1 / RF|NP_595692.1: fructose-bisphosphate aldolase Fba1; EC 4.1.2.13 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

51% id,
99% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory