Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)
Found 90 curated entries in PaperBLAST's database that match '4.1.2.4'.
These curated entries have 57 distinct sequences.
Running ublast with E ≤ 0.01
Found 16 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query
| Echvi_3532: 3-hexulose-6-phosphate synthase and related proteins is similar to: | PaperBLAST |
HPS_MYCGS / Q9LBW4: 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase; EC 4.1.2.43 from Mycobacterium gastri | 64% id, 99% cov |
HPS_METAM / Q48907: 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase; EC 4.1.2.43 from Methylomonas aminofaciens | 45% id, 98% cov |
Q9F6B7: 3-hexulose-6-phosphate synthase (EC 4.1.2.43) from Aminomonas aminovorus | 45% id, 89% cov |
| Echvi_1188: Glycine/serine hydroxymethyltransferase is similar to: | PaperBLAST |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 55% id, 97% cov |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 55% id, 94% cov |
GLYA_METJA / Q58992: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-allo-threonine aldolase; EC 2.1.2.-; EC 4.1.2.49 from Methanocaldococcus jannaschii | 35% id, 94% cov |
| Echvi_1588: deoxyribose-phosphate aldolase is similar to: | PaperBLAST |
Q9AIP7: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus mutans | 47% id, 96% cov |
DEOC_THEKO / Q877I0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermococcus kodakarensis | 45% id, 98% cov |
D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis | 46% id, 96% cov |
| Echvi_4604: Threonine aldolase is similar to: | PaperBLAST |
LTAA_AERJA / O07051: L-allo-threonine aldolase; L-allo-TA; L-allo-threonine acetaldehyde-lyase; EC 4.1.2.49 from Aeromonas jandaei | 45% id, 96% cov |
THA2_ARATH / Q9FPH3: Probable low-specificity L-threonine aldolase 2; Threonine aldolase 2; EC 4.1.2.48 from Arabidopsis thaliana | 43% id, 93% cov |
LTAE_ECOLI / P75823: Low specificity L-threonine aldolase; Low specificity L-TA; EC 4.1.2.48 from Escherichia coli | 41% id, 96% cov |
| Echvi_0155: ketose-bisphosphate aldolases is similar to: | PaperBLAST |
gatY / Q65EY6: D-tagatose-bisphosphate aldolase (EC 4.1.2.40) from Bacillus licheniformis | 39% id, 98% cov |
GATY_KLEOX / Q8VS16: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Klebsiella oxytoca | 40% id, 91% cov |
KBAY_ECOLI / P0AB74: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 37% id, 96% cov |
| Echvi_2849: fructose-bisphosphate aldolase, class II, yeast/E. coli subtype is similar to: | PaperBLAST |
gatY / Q65EY6: D-tagatose-bisphosphate aldolase (EC 4.1.2.40) from Bacillus licheniformis | 30% id, 86% cov |
KBAY_ECOLI / P0AB74: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 28% id, 91% cov |
KBAY_ECOLX / Q9KIP8: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 28% id, 91% cov |
| Echvi_2091: Predicted amino acid aldolase or racemase is similar to: | PaperBLAST |
A0A1C9ZZ39: D-threonine aldolase (EC 4.1.2.42) from Chlamydomonas reinhardtii | 26% id, 82% cov |
| Echvi_3575: ribulose-phosphate 3-epimerase is similar to: | PaperBLAST |
Q9F6B7: 3-hexulose-6-phosphate synthase (EC 4.1.2.43) from Aminomonas aminovorus | 23% id, 88% cov |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 21% id, 44% cov |
| Echvi_3533: 6-phospho 3-hexuloisomerase is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 39% id, 49% cov |
| Echvi_3219: Zn-dependent alcohol dehydrogenases is similar to: | PaperBLAST |
AHNL_LINUS / P93243: Aliphatic (R)-hydroxynitrile lyase; LuHNL; EC 4.1.2.46 from Linum usitatissimum | 24% id, 78% cov |
| Echvi_3959: dihydrodipicolinate synthase is similar to: | PaperBLAST |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 27% id, 65% cov |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 27% id, 58% cov |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 26% id, 51% cov |
| Echvi_3953: Dihydrodipicolinate synthase/N-acetylneuraminate lyase is similar to: | PaperBLAST |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 28% id, 50% cov |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 27% id, 51% cov |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 27% id, 50% cov |
| Echvi_2475: Predicted amino acid aldolase or racemase is similar to: | PaperBLAST |
A0A0J9X243: D-threonine aldolase (EC 4.1.2.42) from Achromobacter xylosoxidans | 29% id, 46% cov |
DTA_ARTSP / O82872: D-threonine aldolase; EC 4.1.2.42 from Arthrobacter sp. | 28% id, 46% cov |
| Echvi_4516: Dihydrodipicolinate synthase/N-acetylneuraminate lyase is similar to: | PaperBLAST |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 26% id, 45% cov |
| Echvi_1524: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 24% id, 46% cov |
| Echvi_1276: Dihydrodipicolinate synthase/N-acetylneuraminate lyase is similar to: | PaperBLAST |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 24% id, 44% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 15 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1362866-1364188 (frame -2) on Echvi_Contig97.1 is similar to: | PaperBLAST |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 54% id, 100% cov |
| 157174-158016 (frame -3) on Echvi_Contig97.1 is similar to: | PaperBLAST |
gatY / Q65EY6: D-tagatose-bisphosphate aldolase (EC 4.1.2.40) from Bacillus licheniformis | 38% id, 100% cov |
GATY_KLEOX / Q8VS16: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Klebsiella oxytoca | 39% id, 95% cov |
GATY_ECOLX / P0C8J7: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 37% id, 96% cov |
| 1464495-1465421 (frame -1) on Echvi_Contig97.1 is similar to: | PaperBLAST |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 21% id, 80% cov |
Lawrence Berkeley National Laboratory