Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 62 curated entries in PaperBLAST's database that match '4.2.1.17' as complete word(s).

These curated entries have 44 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0343: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

ECH_THET8 / Q5SKU3: Putative enoyl-CoA hydratase; TtECH; EC 4.2.1.17 from Thermus thermophilus

44% id,
97% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

32% id,
97% cov

PAAF_ECOLI / P76082: 2,3-dehydroadipyl-CoA hydratase; Enoyl-CoA hydratase; EC 4.2.1.17 from Escherichia coli
YdbR / b1393: putative 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli
P76082: enoyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli

31% id,
97% cov

More...

Echvi_4069: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

43% id,
96% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

42% id,
98% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

41% id,
98% cov

More...

Echvi_0069: Enoyl-CoA hydratase/carnithine racemase
is similar to:
PaperBLAST

H16_A3593 / Q0K5S0: enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

42% id,
93% cov

ECH_THET8 / Q5SKU3: Putative enoyl-CoA hydratase; TtECH; EC 4.2.1.17 from Thermus thermophilus

35% id,
98% cov

paaG / MB|P77467: putative enoyl-CoA hydratase PaaG; EC 4.2.1.17 from Escherichia coli

34% id,
98% cov

More...

Echvi_2341: naphthoate synthase (dihydroxynaphthoic acid synthetase)
is similar to:
PaperBLAST

H16_A3593 / Q0K5S0: enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

33% id,
98% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

29% id,
98% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

29% id,
98% cov

More...

Echvi_1069: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

25% id,
85% cov

Q0KEG0: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

39% id,
50% cov

ECHM_RAT / P14604: Enoyl-CoA hydratase, mitochondrial; mECH; mECH1; Enoyl-CoA hydratase 1; ECHS1; Short-chain enoyl-CoA hydratase; SCEH; EC 4.2.1.17; EC 5.3.3.8 from Rattus norvegicus
P14604: enoyl-CoA hydratase (EC 4.2.1.17); DELTA3,5-DELTA2,4-dienoyl-CoA isomerase (EC 5.3.3.21) from Rattus norvegicus

26% id,
71% cov

More...

Echvi_3304: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

FADB_PSEFR / P28793: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi

38% id,
38% cov

Shewana3_0024: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella sp.

38% id,
38% cov

fadB / Q88L02: FadB (EC 5.3.3.8; EC 1.1.1.35; EC 5.1.2.3; EC 4.2.1.17; EC 1.1.1.36) from Pseudomonas putida

38% id,
38% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory