Curated BLAST for Genomes


Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 14 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1518: chorismate synthase
is similar to:

AROC_YEAST / P28777: Chorismate synthase ARO2; 5-enolpyruvylshikimate-3-phosphate phospholyase; Aromatic amino acid requiring protein 2; EC; EC from Saccharomyces cerevisiae

53% id,
97% cov

AROC_ECOLI / P12008: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EPSP phospholyase; EC from Escherichia coli
AroC / b2329: chorismate synthase (EC from Escherichia coli
aroC / P12008: chorismate synthase (EC from Escherichia coli

52% id,
98% cov

B5AAU3: chorismate synthase (EC from Hordeum vulgare

59% id,
80% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory