Curated BLAST for Genomes


Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3852: argininosuccinate lyase
is similar to:

Echvi_3852: arginosuccinate lyase (EC from Echinicola vietnamensis

100% id,
100% cov

CA265_RS18485: arginosuccinate lyase (EC from Pedobacter sp.

59% id,
100% cov

BT3733: arginosuccinate lyase (EC from Bacteroides thetaiotaomicron

59% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory