Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 40 curated entries in PaperBLAST's database that match '4.3.3.7' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1276: Dihydrodipicolinate synthase/N-acetylneuraminate lyase
is similar to:
PaperBLAST

Q8A3Z0: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bacteroides thetaiotaomicron

61% id,
96% cov

DAPA_THEMA / Q9X1K9: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Thermotoga maritima

32% id,
98% cov

DAPA_METJA / Q57695: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Methanocaldococcus jannaschii

31% id,
99% cov

More...

Echvi_4516: Dihydrodipicolinate synthase/N-acetylneuraminate lyase
is similar to:
PaperBLAST

Q8A3Z0: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bacteroides thetaiotaomicron

50% id,
94% cov

DAPA_METJA / Q57695: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Methanocaldococcus jannaschii

30% id,
97% cov

dapA / Q65JG7: dihydrodipicolinate synthase subunit (EC 4.3.3.7) from Bacillus licheniformis

30% id,
97% cov

More...

Echvi_3959: dihydrodipicolinate synthase
is similar to:
PaperBLAST

DAPA_NEIMB / Q9JZR4: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Neisseria meningitidis
Q9JZR4: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Neisseria meningitidis

42% id,
96% cov

DAPA_PSEAE / Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Pseudomonas aeruginosa
Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Pseudomonas aeruginosa

41% id,
97% cov

dapA / Q04796: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bacillus subtilis

39% id,
100% cov

More...

Echvi_3953: Dihydrodipicolinate synthase/N-acetylneuraminate lyase
is similar to:
PaperBLAST

A9CFV4: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Agrobacterium tumefaciens

31% id,
95% cov

dapA / Q65JG7: dihydrodipicolinate synthase subunit (EC 4.3.3.7) from Bacillus licheniformis

29% id,
100% cov

DAPA_METJA / Q57695: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Methanocaldococcus jannaschii

30% id,
98% cov

More...

Echvi_4343: Dihydrodipicolinate synthase/N-acetylneuraminate lyase
is similar to:
PaperBLAST

DAPA_MYCTU / P9WP25: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Mycobacterium tuberculosis

30% id,
89% cov

DAPA_PSEAE / Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Pseudomonas aeruginosa
Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Pseudomonas aeruginosa

27% id,
99% cov

dapA / P19808: dihydropicolinate synthase subunit (EC 4.3.3.7) from Corynebacterium glutamicum
P19808: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Corynebacterium glutamicum

28% id,
93% cov

More...

Echvi_0926: Dihydrodipicolinate synthase/N-acetylneuraminate lyase
is similar to:
PaperBLAST

Q8A3Z0: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Bacteroides thetaiotaomicron

27% id,
96% cov

DAPA_STAAR / Q6GH13: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Staphylococcus aureus
Q6GH13: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Staphylococcus aureus

26% id,
96% cov

DAPA_STAAC / Q5HG25: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Staphylococcus aureus
Q5HG25: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Staphylococcus aureus

26% id,
96% cov

More...

Echvi_2395: dihydrodipicolinate reductase
is similar to:
PaperBLAST

Q3MFY8: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Trichormus variabilis

33% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory