Curated BLAST for Genomes


Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 14 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_3951: Proline racemase
is similar to:

PRAC_ACESD / E3PTZ4: Proline racemase; PR; AsProR; CsPR; EC from Acetoanaerobium sticklandii

40% id,
99% cov

H3ZMH5: proline racemase (EC; 4-hydroxyproline epimerase (EC from Thermococcus litoralis

40% id,
98% cov

Q9L4Q3: proline racemase (EC from Acetoanaerobium sticklandii

39% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory