Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)
Found 6 curated entries in PaperBLAST's database that match '5.1.1.5' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query
Echvi_1490: alanine racemase is similar to: | PaperBLAST |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 28% id, 99% cov |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 28% id, 87% cov |
Echvi_2799: Predicted amino acid racemase is similar to: | PaperBLAST |
LYSRA_THEMA / Q9X1T3: Lysine racemase; Lys racemase; Ornithine racemase; EC 5.1.1.5; EC 5.1.1.12 from Thermotoga maritima | 28% id, 97% cov |
Echvi_1545: alanine racemase is similar to: | PaperBLAST |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 31% id, 87% cov |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 25% id, 99% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1772731-1773912 (frame -3) on Echvi_Contig97.1 is similar to: | PaperBLAST |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 30% id, 89% cov |
Lawrence Berkeley National Laboratory