Curated BLAST for Genomes


Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0089: methylmalonyl-CoA epimerase
is similar to:

EPI_CERS4 / Q3IZP4: Ethylmalonyl-CoA/methylmalonyl-CoA epimerase; EC 5.1.99.-; EC from Cereibacter sphaeroides

42% id,
97% cov

MCE_PYRHO / O58010: Methylmalonyl-CoA epimerase; DL-methylmalonyl-CoA racemase; EC from Pyrococcus horikoshii

43% id,
95% cov

Msed_0639 / A4YEG2: methylmalonyl-CoA epimerase monomer (EC from Metallosphaera sedula
A4YEG2: methylmalonyl-CoA epimerase (EC from Metallosphaera sedula

33% id,
95% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory