Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 15 curated entries in PaperBLAST's database that match '5.3.1.14' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_1573: Predicted sugar isomerase
is similar to:
PaperBLAST

Echvi_1573: L-rhamnose isomerase (EC 5.3.1.14) from Echinicola vietnamensis

100% id,
100% cov

Q75WH8: L-rhamnose isomerase (EC 5.3.1.14) from Pseudomonas stutzeri

54% id,
99% cov

SMc02321: L-rhamnose isomerase (EC 5.3.1.14) from Sinorhizobium meliloti

54% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory