Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 18 curated entries in PaperBLAST's database that match '5.3.1.24' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2509: Phosphoribosylanthranilate isomerase
is similar to:
PaperBLAST

BT0528: phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Bacteroides thetaiotaomicron

45% id,
98% cov

trpF / Q56320: phosphoribosylanthranilate isomerase subunit (EC 5.3.1.24) from Thermotoga maritima

33% id,
98% cov

trpF: phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Burkholderia multivorans

33% id,
89% cov

More...

Echvi_2515: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
is similar to:
PaperBLAST

HIS4_STRCO / P16250: Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor
P16250: phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Streptomyces coelicolor

35% id,
96% cov

Echvi_2508: Indole-3-glycerol phosphate synthase
is similar to:
PaperBLAST

TrpC / b1262: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli
trpC / P00909: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli
P00909: phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Escherichia coli

35% id,
55% cov

P24920: phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Phytophthora parasitica

40% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory