Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 21 curated entries in PaperBLAST's database that match 'Glycine cleavage system H' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_4084: glycine cleavage system H protein
is similar to:
PaperBLAST

GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus

58% id,
100% cov

GCSH_BACSU / O32174: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis

56% id,
99% cov

GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus

51% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory