Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_2506: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

48% id,
95% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

46% id,
96% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

44% id,
100% cov

Echvi_0658: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

44% id,
95% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

43% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

32% id,
98% cov

Echvi_0226: carbamoyl-phosphate synthase, small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
87% cov

Echvi_0152: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

27% id,
99% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory