Curated BLAST for Genomes

 

Curated BLAST

Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%small' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query

Echvi_0226: carbamoyl-phosphate synthase, small subunit
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

38% id,
97% cov

Echvi_2506: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

31% id,
37% cov

Echvi_0658: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

25% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory