Searching in Echinicola vietnamensis KMM 6221, DSM 17526 (Cola)
Found 2 curated entries in PaperBLAST's database that match 'citramalate isomerase small subunit' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Echinicola vietnamensis KMM 6221, DSM 17526, or try another query
| Echvi_2060: 3-isopropylmalate dehydratase, small subunit is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 35% id, 73% cov |
| Echvi_2061: Isopropylmalate/homocitrate/citramalate synthases is similar to: | PaperBLAST |
DVU1914: isopropylmalate/citramalate isomerase small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 25% id, 94% cov |
| Echvi_4039: aconitate hydratase 1 is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 39% id, 51% cov |
| Echvi_2531: aconitate hydratase, mitochondrial is similar to: | PaperBLAST |
LEUD_METJA / Q58673: Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31 from Methanocaldococcus jannaschii | 37% id, 39% cov |
| Echvi_3833: Isopropylmalate/homocitrate/citramalate synthases is similar to: | PaperBLAST |
DVU1914: isopropylmalate/citramalate isomerase small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 32% id, 42% cov |
DVU1914: isopropylmalate/citramalate isomerase small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 48% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory