Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.59' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query
| RR42_RS20290: choline dehydrogenase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 63% id, 94% cov |
| RR42_RS29710: choline dehydrogenase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 47% id, 94% cov |
| RR42_RS24385: hypothetical protein is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 42% id, 96% cov |
| RR42_RS01280: GMC family oxidoreductase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 40% id, 93% cov |
| RR42_RS24700: glucose-methanol-choline oxidoreductase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 39% id, 93% cov |
| RR42_RS29830: glucose-methanol-choline oxidoreductase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 38% id, 95% cov |
| RR42_RS11005: 4-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 29% id, 97% cov |
| RR42_RS25325: 3-hydroxyisobutyrate dehydrogenase is similar to: | PaperBLAST |
HPD1 / A0A1D8PQ07: 3-hydroxypropanonate dehydrogenase (EC 1.1.1.59) from Candida albicans | 33% id, 79% cov |
| RR42_RS09115: glucose-methanol-choline oxidoreductase is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 31% id, 31% cov |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 32% id, 27% cov |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 53% id, 10% cov |
| RR42_RS24760: hypothetical protein is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 36% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2032304-2034313 (frame +2) on NZ_CP010537 is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 46% id, 98% cov |
| 801409-803100 (frame +1) on NZ_CP010537 is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 42% id, 97% cov |
Lawrence Berkeley National Laboratory