Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 42 curated entries in PaperBLAST's database that match '1.1.1.95' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 32 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS02380: FAD-linked oxidase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

79% id,
100% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

83% id,
92% cov

RR42_RS27010: D-3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

55% id,
97% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

51% id,
97% cov

A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri

52% id,
85% cov

More...

RR42_RS34610: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

32% id,
96% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

34% id,
76% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

29% id,
83% cov

More...

RR42_RS27410: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

31% id,
92% cov

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

27% id,
25% cov

RR42_RS33660: dihydrofolate reductase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

32% id,
90% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

24% id,
82% cov

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

26% id,
70% cov

More...

RR42_RS10510: dihydrofolate reductase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

30% id,
94% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

26% id,
82% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

28% id,
71% cov

More...

RR42_RS02235: 3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

33% id,
83% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

32% id,
87% cov

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

41% id,
63% cov

More...

RR42_RS34260: alcohol dehydrogenase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

30% id,
91% cov

RR42_RS09465: bifunctional glyoxylate/hydroxypyruvate reductase B
is similar to:
PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

28% id,
95% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

30% id,
82% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

38% id,
57% cov

More...

RR42_RS20535: 3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

32% id,
83% cov

PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis

29% id,
76% cov

EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica
Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica

24% id,
84% cov

More...

RR42_RS33330: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

33% id,
79% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

26% id,
83% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

36% id,
56% cov

More...

RR42_RS37380: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

29% id,
88% cov

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

25% id,
91% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

37% id,
58% cov

More...

RR42_RS26540: 3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

40% id,
62% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

29% id,
84% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

36% id,
59% cov

More...

RR42_RS03865: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

32% id,
77% cov

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

31% id,
68% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

31% id,
68% cov

More...

RR42_RS14190: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

31% id,
80% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

34% id,
61% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

25% id,
82% cov

More...

RR42_RS00950: glyoxylate reductase
is similar to:
PaperBLAST

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

26% id,
93% cov

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

26% id,
72% cov

SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana
Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana

30% id,
44% cov

More...

RR42_RS05155: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

30% id,
78% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

29% id,
74% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

34% id,
62% cov

More...

RR42_RS10615: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

32% id,
71% cov

H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori

32% id,
70% cov

SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae

33% id,
67% cov

More...

RR42_RS25775: alcohol dehydrogenase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

32% id,
61% cov

RR42_RS28650: alcohol dehydrogenase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

32% id,
61% cov

RR42_RS09745: alcohol dehydrogenase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

32% id,
52% cov

RR42_RS19860: tartronate semialdehyde reductase
is similar to:
PaperBLAST

PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis

23% id,
39% cov

RR42_RS36940: alcohol dehydrogenase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

36% id,
24% cov

RR42_RS25545: NADPH:quinone oxidoreductase
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori

35% id,
17% cov

RR42_RS29885: glycolate oxidase
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

31% id,
15% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

33% id,
12% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

35% id,
6% cov

More...

RR42_RS06435: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

33% id,
13% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

33% id,
13% cov

RR42_RS29875: glycolate oxidase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

23% id,
18% cov

RR42_RS26635: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

33% id,
11% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

31% id,
11% cov

RR42_RS07415: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

28% id,
12% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

31% id,
11% cov

RR42_RS17300: glycolate oxidase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

31% id,
11% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

32% id,
11% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

27% id,
8% cov

More...

RR42_RS21335: FAD-linked oxidase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

30% id,
11% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

29% id,
11% cov

RR42_RS17285: 2-hydroxy-acid oxidase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

35% id,
6% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

35% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 27 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2267736-2268917 (frame +3) on NZ_CP010536
is similar to:
PaperBLAST

SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae
Also see hits to annotated proteins above

33% id,
75% cov

A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri
Also see hits to annotated proteins above

31% id,
75% cov

A0A2R6X868: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Marchantia polymorpha
Also see hits to annotated proteins above

31% id,
54% cov

More...

1075589-1076722 (frame +2) on NZ_CP010537
is similar to:
PaperBLAST

cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori
Also see hits to annotated proteins above

29% id,
25% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory