Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 26 curated entries in PaperBLAST's database that match '1.13.11.27' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS33500: 4-hydroxyphenylpyruvate dioxygenase is similar to:	PaperBLAST
PfGW456L13_2935: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	80% id, 100% cov
AO353_26925: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	80% id, 100% cov
Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	80% id, 99% cov
P80064: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Pseudomonas sp. P80064: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	79% id, 100% cov
AO356_22845: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	79% id, 99% cov
Ac3H11_1849: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Acidovorax sp.	80% id, 93% cov
Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri	53% id, 97% cov
Q09PG8: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from uncultured soil	51% id, 95% cov
LLY_LEGPC / P69053: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC 1.13.11.27 from Legionella pneumophila	49% id, 98% cov
SO1962: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis Q8EFK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis	42% id, 99% cov
HPPD_STRAW / Q53586: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Streptomyces avermitilis	34% id, 96% cov
Q6KZ98: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Picrophilus torridus	33% id, 89% cov
HPPD1_ASPFU / Q4WHU1: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; L-tyrosine degradation gene cluster protein hppD; Pyomelanin biosynthesis cluster protein hppD; EC 1.13.11.27 from Aspergillus fumigatus	32% id, 89% cov
hppD / Q55810: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Synechocystis sp.	29% id, 93% cov
HPPD_CAEEL / Q22633: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Caenorhabditis elegans	31% id, 85% cov
HPPD_HUMAN / P32754: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Homo sapiens HPD / P32754: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Homo sapiens P32754: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Homo sapiens	28% id, 88% cov
HPPD_RAT / P32755: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; F Alloantigen; F protein; EC 1.13.11.27 from Rattus norvegicus P32755: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Rattus norvegicus	27% id, 88% cov
HPPD_PIG / Q02110: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Sus scrofa	35% id, 52% cov
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RR42_RS32440: 4-hydroxyphenylpyruvate dioxygenase is similar to:	PaperBLAST
AO356_22845: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	43% id, 92% cov
Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	43% id, 92% cov
P80064: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Pseudomonas sp. P80064: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	42% id, 92% cov
AO353_26925: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	42% id, 92% cov
PfGW456L13_2935: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	41% id, 92% cov
Ac3H11_1849: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Acidovorax sp.	44% id, 87% cov
Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri	41% id, 91% cov
LLY_LEGPC / P69053: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC 1.13.11.27 from Legionella pneumophila	38% id, 93% cov
Q09PG8: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from uncultured soil	36% id, 89% cov
SO1962: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis Q8EFK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis	35% id, 93% cov
HPPD_STRAW / Q53586: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Streptomyces avermitilis	31% id, 74% cov
HPPD_CAEEL / Q22633: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Caenorhabditis elegans	27% id, 83% cov
A0A1S5V3J7: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Medicago sativa	25% id, 88% cov
HPPD_ARATH / P93836: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Arabidopsis thaliana	28% id, 71% cov
hppD / Q55810: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Synechocystis sp.	30% id, 63% cov
Q6KZ98: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Picrophilus torridus	31% id, 54% cov
HPPD1_ASPFU / Q4WHU1: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; L-tyrosine degradation gene cluster protein hppD; Pyomelanin biosynthesis cluster protein hppD; EC 1.13.11.27 from Aspergillus fumigatus	33% id, 49% cov
HPPD_RAT / P32755: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; F Alloantigen; F protein; EC 1.13.11.27 from Rattus norvegicus P32755: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Rattus norvegicus	27% id, 50% cov
HPPD_PIG / Q02110: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Sus scrofa	27% id, 50% cov
HPPD_HUMAN / P32754: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Homo sapiens HPD / P32754: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Homo sapiens P32754: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Homo sapiens	27% id, 50% cov
More...

RR42_RS32485: 3-keto-5-aminohexanoate cleavage protein is similar to:	PaperBLAST
Ac3H11_1849: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Acidovorax sp.	34% id, 87% cov
LLY_LEGPC / P69053: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC 1.13.11.27 from Legionella pneumophila	32% id, 92% cov
HPPD_STRAW / Q53586: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Streptomyces avermitilis	27% id, 91% cov
SO1962: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis Q8EFK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis	27% id, 92% cov
HPPD1_ASPFU / Q4WHU1: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; L-tyrosine degradation gene cluster protein hppD; Pyomelanin biosynthesis cluster protein hppD; EC 1.13.11.27 from Aspergillus fumigatus	25% id, 80% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory