Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 39 curated entries in PaperBLAST's database that match '1.4.1.2' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS02570: glutamate dehydrogenase
is similar to:
PaperBLAST

P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima

56% id,
98% cov

gluD / GB|AAA62756.1: NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Clostridium difficile
P27346: glutamate dehydrogenase (EC 1.4.1.2) from Clostridioides difficile

48% id,
97% cov

GUDB_BACSU / P50735: Cryptic catabolic NAD-specific glutamate dehydrogenase GudB; NAD-GDH; EC 1.4.1.2 from Bacillus subtilis

48% id,
94% cov

More...

RR42_RS07270: NAD-glutamate dehydrogenase
is similar to:
PaperBLAST

AZOBR_RS00190: L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) from Azospirillum brasilense

53% id,
100% cov

Q8CJY0: glutamate dehydrogenase (EC 1.4.1.2) from Streptomyces coelicolor

51% id,
96% cov

DHE2_HALED / E1V4J5: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Halomonas elongata

47% id,
100% cov

More...

RR42_RS33640: glutamate dehydrogenase
is similar to:
PaperBLAST

Q9TVN3: glutamate dehydrogenase (EC 1.4.1.2) from Entodinium caudatum

53% id,
98% cov

DHE2_CLOSY / P24295: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Clostridium symbiosum
P24295: glutamate dehydrogenase (EC 1.4.1.2) from Clostridium symbiosum

52% id,
100% cov

P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima

34% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory