Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 4 curated entries in PaperBLAST's database that match '2.6.1.82' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS27405: aminotransferase
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

44% id,
94% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

28% id,
81% cov

RR42_RS01575: omega amino acid--pyruvate aminotransferase
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

35% id,
94% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

30% id,
86% cov

RR42_RS26850: hypothetical protein
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

32% id,
93% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

36% id,
71% cov

RR42_RS26240: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

34% id,
88% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

35% id,
78% cov

RR42_RS26160: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

35% id,
83% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

29% id,
90% cov

RR42_RS21370: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

32% id,
88% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

36% id,
78% cov

RR42_RS16955: acetylornithine aminotransferase
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

32% id,
83% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

27% id,
94% cov

RR42_RS00925: adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

30% id,
77% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

25% id,
92% cov

RR42_RS27380: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

28% id,
82% cov

RR42_RS04235: glutamate-1-semialdehyde aminotransferase
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

31% id,
66% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

25% id,
75% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory