Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 146 curated entries in PaperBLAST's database that match '2.7.1.15'.

These curated entries have 91 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS16080: adenosylcobinamide kinase
is similar to:
PaperBLAST

COBU_SALTY / Q05599: Bifunctional adenosylcobalamin biosynthesis protein CobU; Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase; EC 2.7.1.156; EC 2.7.7.62 from Salmonella typhimurium
cobU / Q05599: adenosylcobinamide-phosphate guanylyltransferase subunit (EC 2.7.1.156; EC 2.7.7.62) from Salmonella typhimurium

41% id,
100% cov

CobU / b1993: cobinamide-P guanylyltransferase / cobinamide kinase (EC 2.7.7.62; EC 2.7.1.156) from Escherichia coli
cobU / RF|NP_416497: bifunctional adenosylcobalamin biosynthesis protein CobU; EC 2.7.1.156; EC 2.7.7.62 from Escherichia coli

39% id,
100% cov

cobP / P29931: CobP (EC 2.7.1.156; EC 2.7.7.62) from Sinorhizobium sp.

38% id,
95% cov

RR42_RS09470: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

29% id,
92% cov

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

26% id,
99% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

28% id,
80% cov

More...

RR42_RS28860: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

28% id,
90% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

31% id,
82% cov

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

29% id,
87% cov

More...

RR42_RS03385: sugar kinase
is similar to:
PaperBLAST

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

32% id,
50% cov

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

28% id,
44% cov

RR42_RS13045: ribose-5-phosphate isomerase A
is similar to:
PaperBLAST

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis

36% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory