Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 17 curated entries in PaperBLAST's database that match '3.1.1.25' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS30140: gluconolaconase
is similar to:
PaperBLAST

Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp.

42% id,
90% cov

AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens

35% id,
96% cov

RR42_RS33665: gluconolactonase
is similar to:
PaperBLAST

AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens

35% id,
98% cov

Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp.

36% id,
93% cov

RR42_RS07895: gluconolactonase
is similar to:
PaperBLAST

P27169: arylesterase (EC 3.1.1.2); 1,4-lactonase (EC 3.1.1.25); quorum-quenching N-acyl-homoserine lactonase (EC 3.1.1.81); aryldialkylphosphatase (EC 3.1.8.1); diisopropyl-fluorophosphatase (EC 3.1.8.2) from Homo sapiens

30% id,
21% cov

P52430: arylesterase (EC 3.1.1.2); 1,4-lactonase (EC 3.1.1.25); aryldialkylphosphatase (EC 3.1.8.1) from Mus musculus

36% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

584117-585130 (frame +2) on NZ_CP010537
is similar to:
PaperBLAST

B2LYJ5: 1,4-lactonase (EC 3.1.1.25) from Fusarium proliferatum

31% id,
62% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory