Curated BLAST for Genomes


Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 185 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS34985: mandelate racemase
is similar to:

Q2PCE2: alpha-glucosidase (EC from Ferroplasma acidiphilum

24% id,
75% cov

RR42_RS05300: TonB-dependent receptor
is similar to:

BAC57563.1: α-glucosidase (AgdA) (EC

53% id,
4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory