Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 18 curated entries in PaperBLAST's database that match '3.5.1.38' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS26140: glutaminase
is similar to:
PaperBLAST

ASPQ_PSES7 / P10182: Glutaminase-asparaginase; L-ASNase/L-GLNase; L-asparagine/L-glutamine amidohydrolase; PGA; EC 3.5.1.38 from Pseudomonas sp.

60% id,
99% cov

ASPQ_PSEFA / O68897: Glutaminase-asparaginase; L-ASNase/L-GLNase; L-asparagine/L-glutamine amidohydrolase; EC 3.5.1.38 from Pseudomonas fluorescens

60% id,
94% cov

ansB / PDB|1AGX_A: glutaminase-asparaginase; EC 3.5.1.38 from Acinetobacter glutaminasificans

53% id,
100% cov

More...

RR42_RS27580: glutaminase
is similar to:
PaperBLAST

GlsB / b1524: glutaminase 2 (EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
glsB / P0A6W0: glutaminase 2 (EC 3.5.1.38) from Escherichia coli

51% id,
99% cov

GlsA / b0485: glutaminase 1 (EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
glsA / P77454: glutaminase 1 (EC 3.5.1.38) from Escherichia coli

36% id,
93% cov

Gls2 / P28492: glutaminase subunit (EC 3.5.1.38) from Rattus norvegicus

37% id,
50% cov

More...

RR42_RS12610: glutaminase
is similar to:
PaperBLAST

ASPQ_PSES7 / P10182: Glutaminase-asparaginase; L-ASNase/L-GLNase; L-asparagine/L-glutamine amidohydrolase; PGA; EC 3.5.1.38 from Pseudomonas sp.

41% id,
97% cov

AnsB / b2957: L-asparaginase 2 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli
ansB / P00805: L-asparaginase 2 (EC 3.5.1.38) from Escherichia coli

42% id,
93% cov

ansB / PDB|1AGX_A: glutaminase-asparaginase; EC 3.5.1.38 from Acinetobacter glutaminasificans

39% id,
98% cov

More...

RR42_RS05290: ankyrin
is similar to:
PaperBLAST

ASPG / Q86U10: 60 kDa lysophospholipase (EC 3.1.1.47; EC 3.5.1.38) from Homo sapiens

30% id,
31% cov

RR42_RS15275: ankyrin
is similar to:
PaperBLAST

ASPG / Q86U10: 60 kDa lysophospholipase (EC 3.1.1.47; EC 3.5.1.38) from Homo sapiens

30% id,
23% cov

RR42_RS10880: ankyrin
is similar to:
PaperBLAST

ASPG / Q86U10: 60 kDa lysophospholipase (EC 3.1.1.47; EC 3.5.1.38) from Homo sapiens

31% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory