Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 30 curated entries in PaperBLAST's database that match '3.5.1.9' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS15380: kynurenine formamidase
is similar to:
PaperBLAST

KYNB_CUPMC / P0C8P4: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Cupriavidus metallidurans
kynB: kynurenine formamidase; EC 3.5.1.9 from Ralstonia metallidurans

77% id,
98% cov

KYNB_BURCJ / B4E9I9: Kynurenine formamidase; KFA; KFase; Arylformamidase; N-formylkynurenine formamidase; FKF; EC 3.5.1.9 from Burkholderia cenocepacia
B4E9I9: arylformamidase (EC 3.5.1.9) from Burkholderia cenocepacia

72% id,
96% cov

PS417_23710: Kynurenine formamidase, bacterial (EC 3.5.1.9) from Pseudomonas simiae

71% id,
94% cov

More...

RR42_RS16840: aylformamidase
is similar to:
PaperBLAST

acmF / D6R242: arylformamidase (EC 3.5.1.9) from Streptomyces anulatus

36% id,
92% cov

M0RC77: arylformamidase (EC 3.5.1.9) from Rattus norvegicus

29% id,
97% cov

E1C2H6: arylformamidase (EC 3.5.1.9) from Gallus gallus

28% id,
98% cov

More...

RR42_RS20140: alpha/beta hydrolase
is similar to:
PaperBLAST

Q9X8R1: arylformamidase (EC 3.5.1.9) from Streptomyces coelicolor

28% id,
63% cov

acmF / D6R242: arylformamidase (EC 3.5.1.9) from Streptomyces anulatus

34% id,
49% cov

RR42_RS28645: S-formylglutathione hydrolase
is similar to:
PaperBLAST

Q9X8R1: arylformamidase (EC 3.5.1.9) from Streptomyces coelicolor

31% id,
57% cov

RR42_RS24570: alpha/beta hydrolase
is similar to:
PaperBLAST

acmF / D6R242: arylformamidase (EC 3.5.1.9) from Streptomyces anulatus

33% id,
49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory