Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.13' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS16900: N-formimino-L-glutamate deiminase
is similar to:
PaperBLAST

Ac3H11_2549: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp.

62% id,
98% cov

Pf6N2E2_3808: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

53% id,
100% cov

AO356_09645: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

53% id,
100% cov

More...

RR42_RS07300: hydroxydechloroatrazine ethylaminohydrolase
is similar to:
PaperBLAST

Ac3H11_2549: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp.

25% id,
87% cov

Pf6N2E2_3808: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens

22% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory