Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 20 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 18 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS23245: fumarylacetoacetate hydrolase
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

78% id,
100% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

46% id,
100% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

33% id,
92% cov

More...

RR42_RS00735: fumarylacetoacetate hydrolase
is similar to:
PaperBLAST

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri

63% id,
100% cov

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

61% id,
98% cov

RR42_RS31270: fumarylacetoacetase
is similar to:
PaperBLAST

FAAA_MOUSE / P35505: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Mus musculus
P35505: fumarylacetoacetase (EC 3.7.1.2) from Mus musculus

58% id,
99% cov

FAAA_HUMAN / P16930: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Homo sapiens
FAH / P16930: Fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens
P16930: fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens

57% id,
99% cov

FAAA_RAT / P25093: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Rattus norvegicus

57% id,
99% cov

More...

RR42_RS30515: 5-carboxymethyl-2-hydroxymuconate isomerase
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

58% id,
97% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

41% id,
97% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

34% id,
88% cov

More...

RR42_RS10515: fumarylacetoacetate hydrolase
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

56% id,
98% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

37% id,
99% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

32% id,
92% cov

More...

RR42_RS01965: 5-carboxymethyl-2-hydroxymuconate isomerase
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

55% id,
98% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

42% id,
99% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

34% id,
92% cov

RR42_RS09905: fumarylacetoacetase
is similar to:
PaperBLAST

FAH_ARATH / Q8RW90: Fumarylacetoacetase; Fumarylacetoacetate hydrolase; AtFAH; Protein SHORT-DAY SENSITIVE CELL DEATH 1; EC 3.7.1.2 from Arabidopsis thaliana
Q8RW90: fumarylacetoacetase (EC 3.7.1.2) from Arabidopsis thaliana

45% id,
100% cov

FAAA_CAEEL / Q94272: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Caenorhabditis elegans
Q94272: fumarylacetoacetase (EC 3.7.1.2) from Caenorhabditis elegans

46% id,
97% cov

FAAA_HUMAN / P16930: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Homo sapiens
FAH / P16930: Fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens
P16930: fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens

45% id,
98% cov

More...

RR42_RS16615: hypothetical protein
is similar to:
PaperBLAST

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) from Pseudomonas stutzeri

44% id,
98% cov

SO1670: fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis

41% id,
98% cov

RR42_RS24410: 5-carboxymethyl-2-hydroxymuconate isomerase
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

42% id,
89% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

31% id,
92% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

38% id,
72% cov

More...

RR42_RS00385: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

37% id,
100% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

35% id,
94% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

39% id,
73% cov

More...

RR42_RS24170: hypothetical protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

36% id,
100% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

33% id,
93% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

30% id,
94% cov

More...

RR42_RS24275: hypothetical protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

37% id,
95% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

35% id,
89% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

35% id,
89% cov

More...

RR42_RS31355: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

33% id,
99% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

26% id,
93% cov

RR42_RS27830: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

34% id,
91% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

35% id,
81% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

29% id,
92% cov

More...

RR42_RS05150: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
is similar to:
PaperBLAST

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

34% id,
88% cov

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

38% id,
77% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

29% id,
92% cov

More...

RR42_RS24080: hypothetical protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

37% id,
79% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

36% id,
64% cov

RR42_RS24230: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

33% id,
88% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

35% id,
81% cov

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

28% id,
93% cov

More...

RR42_RS27825: 4-hydroxyphenylacetate isomerase
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

30% id,
69% cov

A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata

27% id,
67% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory