Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)
Found 6 curated entries in PaperBLAST's database that match '4.2.1.140' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query
| RR42_RS23065: L-rhamnose 1-epimerase is similar to: | PaperBLAST |
YidU / b4478: D-galactonate dehydratase (EC 4.2.1.140; EC 4.2.1.6) from Escherichia coli | 31% id, 91% cov |
GAD_PICTO / Q6L1T2: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus | 28% id, 86% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 28% id, 86% cov |
| RR42_RS34985: mandelate racemase is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 27% id, 85% cov |
| RR42_RS22655: mandelate racemase is similar to: | PaperBLAST |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 24% id, 92% cov |
GAD_PICTO / Q6L1T2: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus | 24% id, 71% cov |
| RR42_RS34970: bifunctional D-altronate/D-mannonate dehydratase is similar to: | PaperBLAST |
YidU / b4478: D-galactonate dehydratase (EC 4.2.1.140; EC 4.2.1.6) from Escherichia coli | 29% id, 54% cov |
YidU / b4478: D-galactonate dehydratase (EC 4.2.1.140; EC 4.2.1.6) from Escherichia coli | 39% id, 37% cov |
GAD_SACS2 / Q97U27: D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus | 31% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory