Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.80' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS27885: 2-keto-4-pentenoate hydratase
is similar to:
PaperBLAST

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

70% id,
96% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

64% id,
97% cov

MHPD_ECOLI / P77608: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Escherichia coli
MhpS / b0350: 2-hydroxypentadienoate hydratase (EC 4.2.1.80) from Escherichia coli
mhpD / P77608: 2-hydroxypentadienoate hydratase (EC 4.2.1.80) from Escherichia coli
P77608: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Escherichia coli

63% id,
94% cov

More...

RR42_RS32645: 2-keto-4-pentenoate hydratase
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

64% id,
98% cov

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Comamonas testosteroni

65% id,
93% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

45% id,
98% cov

More...

RR42_RS05105: 2-keto-4-pentenoate hydratase
is similar to:
PaperBLAST

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

65% id,
96% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

61% id,
97% cov

cmtF / Q51981: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

59% id,
97% cov

More...

RR42_RS31850: 2-keto-4-pentenoate hydratase
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

61% id,
100% cov

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Comamonas testosteroni

58% id,
93% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

47% id,
97% cov

More...

RR42_RS32640: 4-oxalocrotonate decarboxylase
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

42% id,
96% cov

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Comamonas testosteroni

40% id,
94% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

37% id,
98% cov

More...

RR42_RS27850: 2-oxo-hepta-3-ene-1,7-dioate hydratase
is similar to:
PaperBLAST

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

39% id,
97% cov

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

38% id,
100% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

39% id,
96% cov

More...

RR42_RS01965: 5-carboxymethyl-2-hydroxymuconate isomerase
is similar to:
PaperBLAST

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Comamonas testosteroni

30% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory