Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)
Found 17 curated entries in PaperBLAST's database that match '4.2.1.82' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 14 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query
| RR42_RS33950: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 44% id, 99% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 43% id, 99% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 41% id, 99% cov |
| RR42_RS18585: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 43% id, 100% cov |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 42% id, 100% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 41% id, 99% cov |
| RR42_RS33305: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 38% id, 99% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 37% id, 99% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 37% id, 97% cov |
| RR42_RS31070: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 39% id, 94% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 38% id, 94% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 37% id, 93% cov |
| RR42_RS16210: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 33% id, 88% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 33% id, 87% cov |
Pf6N2E2_1668: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens | 32% id, 88% cov |
| RR42_RS23065: L-rhamnose 1-epimerase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 30% id, 88% cov |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 28% id, 87% cov |
| RR42_RS34970: bifunctional D-altronate/D-mannonate dehydratase is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 29% id, 87% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 32% id, 37% cov |
| RR42_RS22655: mandelate racemase is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 27% id, 91% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 25% id, 95% cov |
| RR42_RS06125: phosphogluconate dehydratase is similar to: | PaperBLAST |
YJHG_ECOLI / P39358: D-xylonate dehydratase YjhG; EC 4.2.1.82 from Escherichia coli | 31% id, 79% cov |
YAGF_ECOLI / P77596: D-xylonate dehydratase YagF; EC 4.2.1.82 from Escherichia coli | 31% id, 78% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 29% id, 80% cov |
| RR42_RS37440: phosphogluconate dehydratase is similar to: | PaperBLAST |
YJHG_ECOLI / P39358: D-xylonate dehydratase YjhG; EC 4.2.1.82 from Escherichia coli | 33% id, 74% cov |
xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides | 28% id, 84% cov |
XYLD_CAUVC / Q9A9Z2: D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides | 28% id, 84% cov |
| RR42_RS34985: mandelate racemase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 26% id, 85% cov |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 26% id, 85% cov |
| RR42_RS21835: muconate cycloisomerase is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 24% id, 93% cov |
| RR42_RS33065: mandelate racemase is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 24% id, 91% cov |
| RR42_RS23175: mandelate racemase is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 22% id, 73% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 226909-228111 (frame +1) on NZ_CP010537 is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 24% id, 95% cov |
| 2824163-2825434 (frame -3) on NZ_CP010537 is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 24% id, 92% cov |
| 531667-532941 (frame +1) on NZ_CP010537 is similar to: | PaperBLAST |
XAD_HALVD / D4GP40: D-xylonate dehydratase; XAD; EC 4.2.1.82 from Haloferax volcanii | 22% id, 74% cov |
Lawrence Berkeley National Laboratory