Curated BLAST for Genomes


Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 17 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS28130: N-acylglucosamine 2-epimerase
is similar to:

MANI_THEFU / A0A077LPS9: D-mannose isomerase; EC from Thermobifida fusca

29% id,
86% cov

HSERO_RS03650: Mannose isomerase (EC from Herbaspirillum seropedicae

28% id,
85% cov

Ac3H11_2078: D-mannose isomerase (EC from Acidovorax sp.

30% id,
75% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory