Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 12 curated entries in PaperBLAST's database that match '5.3.2.6'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS32635: 4-oxalocrotonate tautomerase
is similar to:
PaperBLAST

P49172: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas sp.

51% id,
100% cov

cnbG / Q38M36: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Comamonas testosteroni

46% id,
100% cov

4OT1_PSEPU / Q01468: 2-hydroxymuconate tautomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Pseudomonas putida
xylH / Q01468: 4-oxalocrotonate tautomerase subunit (EC 5.3.2.6) from Pseudomonas putida
Q01468: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas putida

46% id,
100% cov

More...

RR42_RS15120: 4-oxalocrotonate tautomerase
is similar to:
PaperBLAST

A2SL37: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Methylibium petroleiphilum

37% id,
87% cov

P49172: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas sp.

30% id,
89% cov

RR42_RS11545: 4-oxalocrotonate tautomerase
is similar to:
PaperBLAST

4OT_BACSU / P70994: 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis

29% id,
100% cov

A9W9U6: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Chloroflexus aurantiacus

29% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory