Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)
Found 4 curated entries in PaperBLAST's database that match '5.3.3.7' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query
| RR42_RS11275: 3-methylitaconate isomerase is similar to: | PaperBLAST |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 84% id, 98% cov |
ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis | 31% id, 80% cov |
| RR42_RS28585: molybdenum ABC transporter substrate-binding protein is similar to: | PaperBLAST |
AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. | 48% id, 95% cov |
| RR42_RS23050: 4-oxalomesaconate tautomerase is similar to: | PaperBLAST |
ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis | 46% id, 81% cov |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 34% id, 97% cov |
| RR42_RS06320: 3-methylitaconate isomerase is similar to: | PaperBLAST |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 50% id, 43% cov |
ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis | 43% id, 39% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1768952-1769893 (frame +2) on NZ_CP010537 is similar to: | PaperBLAST |
AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. | 48% id, 97% cov |
Lawrence Berkeley National Laboratory