Curated BLAST

Curated BLAST for Genomes

Found 1 curated entries in PaperBLAST's database that match '2-deoxy-3-keto-D-ribonoate cleavage enzyme' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS25175: 3-keto-5-aminohexanoate cleavage protein is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	66% id, 100% cov

RR42_RS24450: 3-keto-5-aminohexanoate cleavage protein is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	63% id, 100% cov

RR42_RS33585: 3-keto-5-aminohexanoate cleavage protein is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	61% id, 98% cov

RR42_RS32490: 3-keto-5-aminohexanoate cleavage protein is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	33% id, 96% cov

RR42_RS10310: NADPH:quinone reductase is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	33% id, 97% cov

RR42_RS34675: NADPH:quinone reductase is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	39% id, 39% cov

RR42_RS23480: 3-keto-5-aminohexanoate cleavage protein is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	41% id, 37% cov

RR42_RS31045: class III aminotransferase is similar to:	PaperBLAST
PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae	34% id, 35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory