Curated BLAST for Genomes

 

Curated BLAST

Searching in Cupriavidus basilensis FW507-4G11 (Cup4G11)

Found 27 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Cupriavidus basilensis FW507-4G11, or try another query

RR42_RS21960: cysteine synthase
is similar to:
PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

47% id,
93% cov

RR42_RS14320: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

38% id,
100% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

39% id,
96% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

41% id,
91% cov

More...

RR42_RS06465: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:
PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

39% id,
98% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

39% id,
94% cov

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

34% id,
99% cov

More...

RR42_RS04535: cysteine synthase
is similar to:
PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

40% id,
93% cov

RR42_RS32610: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:
PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

38% id,
96% cov

mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans
B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans

36% id,
92% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

44% id,
56% cov

More...

RR42_RS31610: cystathionine beta-lyase
is similar to:
PaperBLAST

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

37% id,
98% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

37% id,
98% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

40% id,
88% cov

More...

RR42_RS11250: cysteine synthase
is similar to:
PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

36% id,
97% cov

RR42_RS30610: cystathionine beta-lyase
is similar to:
PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

34% id,
99% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

35% id,
95% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

34% id,
99% cov

More...

RR42_RS07655: cystathionine beta-lyase
is similar to:
PaperBLAST

CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus

32% id,
96% cov

CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus
Q8VCN5: cystathionine gamma-lyase (EC 4.4.1.1) from Mus musculus

32% id,
96% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

30% id,
95% cov

More...

RR42_RS06025: cysteine desulfurase
is similar to:
PaperBLAST

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

25% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory