Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 10 curated entries in PaperBLAST's database that match '1.1.1.23' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_0979: Histidinol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis | 59% id, 100% cov |
HISX_MYCTU / P9WNW9: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Mycobacterium tuberculosis | 44% id, 97% cov |
HISX_ECOLI / P06988: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Escherichia coli | 44% id, 95% cov |
Dshi_2034: Histidinol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
HISX_SALTY / P10370: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium | 37% id, 95% cov |
Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis | 36% id, 96% cov |
HISX_ECOLI / P06988: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Escherichia coli | 35% id, 96% cov |
Dshi_2242: Histidinol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis | 35% id, 96% cov |
HISX_MYCTU / P9WNW9: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Mycobacterium tuberculosis | 35% id, 94% cov |
HISX_SALTY / P10370: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium | 35% id, 93% cov |
Dshi_1515: Phosphoribosyl-AMP cyclohydrolase (RefSeq) is similar to: | PaperBLAST |
HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae | 36% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
2153706-2155019 (frame +3) on 57145 is similar to: | PaperBLAST |
HISX_SALTY / P10370: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium | 36% id, 97% cov |
Lawrence Berkeley National Laboratory