Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 31 curated entries in PaperBLAST's database that match '1.1.1.28' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1361: D-lactate dehydrogenase (cytochrome) (RefSeq) is similar to:	PaperBLAST
A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus	49% id, 94% cov
G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae	43% id, 72% cov
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix	33% id, 91% cov

Dshi_2643: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) is similar to:	PaperBLAST
2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera	43% id, 79% cov
Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa	36% id, 85% cov
CH_091801: D-lactate dehydrogenase; EC 1.1.1.28 from Leuconostoc mesenteroides D-ldh / P51011: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Leuconostoc mesenteroides	33% id, 83% cov
F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus	31% id, 90% cov
O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus	29% id, 89% cov
O83080: D-lactate dehydrogenase (EC 1.1.1.28) from Treponema pallidum	28% id, 88% cov
Q8EI78: D-lactate dehydrogenase (EC 1.1.1.28) from Shewanella oneidensis	26% id, 95% cov
Q1GAA2: D-lactate dehydrogenase (EC 1.1.1.28); D-2-hydroxyacid dehydrogenase (NAD+) (EC 1.1.1.345) from Lactobacillus delbrueckii	27% id, 91% cov
LDHD_PEDAC / Q59642: D-lactate/D-glycerate dehydrogenase; D-LDH/GDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28; EC 1.1.1.29 from Pediococcus acidilactici ldhD / GI\|897794: D-lactate dehydrogenase; EC 1.1.1.28; EC 1.1.1.81 from Pediococcus acidilactici	29% id, 82% cov
E0NDE9: D-lactate dehydrogenase (EC 1.1.1.28) from Pediococcus acidilactici	29% id, 82% cov
LDHD_LACDA / P26297: D-lactate dehydrogenase; D-LDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii ldhA / OMNI\|NTL01LD0096: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii	29% id, 82% cov
A0A0R1RJ30: D-lactate dehydrogenase (EC 1.1.1.28) from Furfurilactobacillus rossiae	30% id, 77% cov
ldhD / Q88VJ2: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Lactiplantibacillus plantarum C0LJH4: D-lactate dehydrogenase (EC 1.1.1.28) from Lactiplantibacillus plantarum	26% id, 78% cov
CH_091795: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus pentosus	25% id, 78% cov
More...

Dshi_2970: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) is similar to:	PaperBLAST
2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera	33% id, 96% cov
F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus	35% id, 88% cov
O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus	29% id, 96% cov
HtpH / b1380: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli ldhA: D-lactate dehydrogenase; EC 1.1.1.28 from Escherichia coli ldhA / P52643: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli	26% id, 100% cov
A0A140N893: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli	26% id, 100% cov
Q1GAA2: D-lactate dehydrogenase (EC 1.1.1.28); D-2-hydroxyacid dehydrogenase (NAD+) (EC 1.1.1.345) from Lactobacillus delbrueckii	28% id, 92% cov
Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa	31% id, 84% cov
Q8EI78: D-lactate dehydrogenase (EC 1.1.1.28) from Shewanella oneidensis	27% id, 93% cov
GB\|CAA47255.1: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus helveticus P30901: D-lactate dehydrogenase (EC 1.1.1.28) from Lactobacillus helveticus	27% id, 91% cov
A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus	32% id, 77% cov
Q8RG11: D-lactate dehydrogenase (EC 1.1.1.28) from Fusobacterium nucleatum	28% id, 85% cov
LDHD_LACDA / P26297: D-lactate dehydrogenase; D-LDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii ldhA / OMNI\|NTL01LD0096: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii	27% id, 88% cov
A0A0R1RJ30: D-lactate dehydrogenase (EC 1.1.1.28) from Furfurilactobacillus rossiae	26% id, 89% cov
ldhD / Q88VJ2: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Lactiplantibacillus plantarum C0LJH4: D-lactate dehydrogenase (EC 1.1.1.28) from Lactiplantibacillus plantarum	26% id, 86% cov
O83080: D-lactate dehydrogenase (EC 1.1.1.28) from Treponema pallidum	31% id, 73% cov
CH_091795: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus pentosus	26% id, 86% cov
CH_091801: D-lactate dehydrogenase; EC 1.1.1.28 from Leuconostoc mesenteroides D-ldh / P51011: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Leuconostoc mesenteroides	25% id, 89% cov
E0NDE9: D-lactate dehydrogenase (EC 1.1.1.28) from Pediococcus acidilactici	27% id, 72% cov
LDHD_PEDAC / Q59642: D-lactate/D-glycerate dehydrogenase; D-LDH/GDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28; EC 1.1.1.29 from Pediococcus acidilactici ldhD / GI\|897794: D-lactate dehydrogenase; EC 1.1.1.28; EC 1.1.1.81 from Pediococcus acidilactici	26% id, 72% cov
More...

Dshi_2076: FAD linked oxidase domain protein (RefSeq) is similar to:	PaperBLAST
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix	32% id, 96% cov
A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus	32% id, 86% cov
G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae	29% id, 69% cov

Dshi_3318: D-3-phosphoglycerate dehydrogenase (RefSeq) is similar to:	PaperBLAST
A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus	31% id, 96% cov
F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus	32% id, 90% cov
HtpH / b1380: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli ldhA: D-lactate dehydrogenase; EC 1.1.1.28 from Escherichia coli ldhA / P52643: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli	31% id, 91% cov
Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa	32% id, 87% cov
Q1GAA2: D-lactate dehydrogenase (EC 1.1.1.28); D-2-hydroxyacid dehydrogenase (NAD+) (EC 1.1.1.345) from Lactobacillus delbrueckii	29% id, 96% cov
Q8RG11: D-lactate dehydrogenase (EC 1.1.1.28) from Fusobacterium nucleatum	30% id, 95% cov
A0A140N893: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli	31% id, 91% cov
LDHD_LACDA / P26297: D-lactate dehydrogenase; D-LDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii ldhA / OMNI\|NTL01LD0096: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii	31% id, 91% cov
A0A0R1RJ30: D-lactate dehydrogenase (EC 1.1.1.28) from Furfurilactobacillus rossiae	30% id, 92% cov
LDHD_PEDAC / Q59642: D-lactate/D-glycerate dehydrogenase; D-LDH/GDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28; EC 1.1.1.29 from Pediococcus acidilactici ldhD / GI\|897794: D-lactate dehydrogenase; EC 1.1.1.28; EC 1.1.1.81 from Pediococcus acidilactici	32% id, 87% cov
E0NDE9: D-lactate dehydrogenase (EC 1.1.1.28) from Pediococcus acidilactici	32% id, 87% cov
CH_091801: D-lactate dehydrogenase; EC 1.1.1.28 from Leuconostoc mesenteroides D-ldh / P51011: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Leuconostoc mesenteroides	32% id, 84% cov
O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus	30% id, 88% cov
ldhD / Q88VJ2: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Lactiplantibacillus plantarum C0LJH4: D-lactate dehydrogenase (EC 1.1.1.28) from Lactiplantibacillus plantarum	29% id, 92% cov
CH_091795: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus pentosus	29% id, 92% cov
GB\|CAA47255.1: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus helveticus P30901: D-lactate dehydrogenase (EC 1.1.1.28) from Lactobacillus helveticus	31% id, 86% cov
Q8EI78: D-lactate dehydrogenase (EC 1.1.1.28) from Shewanella oneidensis	34% id, 73% cov
O83080: D-lactate dehydrogenase (EC 1.1.1.28) from Treponema pallidum	27% id, 89% cov
2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera	30% id, 80% cov
vanH / Q7B609: D-lactate dehydrogenase (EC 1.1.1.28) from Enterococcus faecium	32% id, 71% cov
F8RPR8: D-lactate dehydrogenase (EC 1.1.1.28) from Weizmannia coagulans	29% id, 77% cov
More...

Dshi_1001: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) is similar to:	PaperBLAST
Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa	35% id, 80% cov
F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus	31% id, 88% cov
vanH / Q7B609: D-lactate dehydrogenase (EC 1.1.1.28) from Enterococcus faecium	29% id, 91% cov
O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus	28% id, 92% cov
A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus	32% id, 82% cov
2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera	30% id, 79% cov
O83080: D-lactate dehydrogenase (EC 1.1.1.28) from Treponema pallidum	31% id, 78% cov
F8RPR8: D-lactate dehydrogenase (EC 1.1.1.28) from Weizmannia coagulans	27% id, 88% cov
CH_091795: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus pentosus	28% id, 85% cov
ldhD / Q88VJ2: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Lactiplantibacillus plantarum C0LJH4: D-lactate dehydrogenase (EC 1.1.1.28) from Lactiplantibacillus plantarum	28% id, 85% cov
LDHD_PEDAC / Q59642: D-lactate/D-glycerate dehydrogenase; D-LDH/GDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28; EC 1.1.1.29 from Pediococcus acidilactici ldhD / GI\|897794: D-lactate dehydrogenase; EC 1.1.1.28; EC 1.1.1.81 from Pediococcus acidilactici	27% id, 89% cov
LDHD_LACDA / P26297: D-lactate dehydrogenase; D-LDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii ldhA / OMNI\|NTL01LD0096: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii	27% id, 87% cov
Q8EI78: D-lactate dehydrogenase (EC 1.1.1.28) from Shewanella oneidensis	27% id, 88% cov
GB\|CAA47255.1: D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus helveticus P30901: D-lactate dehydrogenase (EC 1.1.1.28) from Lactobacillus helveticus	26% id, 90% cov
E0NDE9: D-lactate dehydrogenase (EC 1.1.1.28) from Pediococcus acidilactici	26% id, 89% cov
HtpH / b1380: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli ldhA: D-lactate dehydrogenase; EC 1.1.1.28 from Escherichia coli ldhA / P52643: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli	28% id, 79% cov
A0A140N893: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli	28% id, 79% cov
A0A0R1RJ30: D-lactate dehydrogenase (EC 1.1.1.28) from Furfurilactobacillus rossiae	28% id, 80% cov
CH_091801: D-lactate dehydrogenase; EC 1.1.1.28 from Leuconostoc mesenteroides D-ldh / P51011: D-lactate dehydrogenase subunit (EC 1.1.1.28) from Leuconostoc mesenteroides	26% id, 85% cov
Q1GAA2: D-lactate dehydrogenase (EC 1.1.1.28); D-2-hydroxyacid dehydrogenase (NAD+) (EC 1.1.1.345) from Lactobacillus delbrueckii	29% id, 72% cov
More...

Dshi_2896: FAD linked oxidase domain protein (RefSeq) is similar to:	PaperBLAST
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix	27% id, 99% cov
A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus	29% id, 93% cov
G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae	29% id, 69% cov

Dshi_0590: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) is similar to:	PaperBLAST
Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa	30% id, 81% cov
Q8RG11: D-lactate dehydrogenase (EC 1.1.1.28) from Fusobacterium nucleatum	24% id, 81% cov
vanH / Q7B609: D-lactate dehydrogenase (EC 1.1.1.28) from Enterococcus faecium	34% id, 50% cov

Dshi_3324: FAD linked oxidase domain protein (RefSeq) is similar to:	PaperBLAST
A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus	25% id, 68% cov
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix	27% id, 59% cov
A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus	31% id, 43% cov
G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae	27% id, 46% cov
More...

Dshi_1380: FAD linked oxidase domain protein (RefSeq) is similar to:	PaperBLAST
G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae	26% id, 53% cov

Dshi_2895: FAD linked oxidase domain protein (RefSeq) is similar to:	PaperBLAST
Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix	31% id, 30% cov
G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae	25% id, 34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory